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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925106.1_cds_XP_016473375.1_65511
CDS Infomation

[gene=LOC107795280] [db_xref=GeneID:107795280] [protein=protein trichome birefringence-like] [protein_id=XP_016473375.1] [location=complement(join(7976..8327,8531..8689,8784..8977,9081..9273,9792..10870))] [gbkey=CDS]
Sequence

ATGGCAGAAACAGCAAAATATGCACCTATTAATGGTGGAACTCTGGTTACAGACTTAAAA
ACTCACTTCTCAATTGTCAAAACCAAAAGAAGTATTGCATGTGCATATGGTTTTGTGTTT
GTTTTCATTGTTGTCACCACTTTCTTGGCTTTTACTCCTAATCCTAATAACTCTTCTTCT
CCATGGTTTACTAACATTTTTTCATTAAGCAGTAGCAGAGTAGAAGATGGGACTTATAGA
TCTCACTTCTCTTCCATTTTCTCTAACCTTTTCCCTAAATCTTCACAGCAAGTTCAGAAT
CTTGTTGCAAATAATGTTCCAACAATTTCAAACACCAAATTTGAGCAACCCCATTTGAAT
AAAGAGCCATCAATTGGTCAAAAACATACTCAGAATAATGAGTCTCATGATAAAGTTGGA
GTCTTGGAAAAGCCCTTTAACCAGAGTACAGTTTTGGACCAGAAGCCTTATGTAAATGTT
ACTGTCCCAATAAATTCTTCTGTGTTGAGTTATAAAGAATCATCAGTTGTGAAGAATCAG
ACTCAAAGTAAAGATTTTGATGATAAAGTTGGAATCTTGAAGGCAAATCAGAGCACAATT
CAGGCTGCTAACTCTCCTGTGAATGTGAATCAGACACAATGTAAAAAATTTGATGATAAA
GTTGGAATTTTGAAGGCAAATCAGAGCACAATTGAGGCTACAAAGTCTCCGGTTAATGTG
AATCAGACTGAAAATTCAGCACCAAAGTACTCTTATGGGGACAAAAATGCAAATGGGAAT
GGAGAAAAGGGAATTATAGAGAAGGAAGTGAAGAAAAATTTCACTTCTTCTTTGGTGAAG
AAGCAGAGAAATGAGACAAATTTGGATGTGTCAGTGAAGAAAGGAGATGAAGATTTGGTT
AAGTCTTTGTTGAATTGTGATTTCTTTGATGGGAATTGGGTTACAGATGAGTCTTATCCT
TTGTACAAACCTGGTTCTTGTTCTCTTATTGATGAGCAATTCAGTTGTTTTCTTAATGGG
AGGCCTGATAGTGGTTACTTAAAGATGAAATGGAAGCCCAAGGCCTGCACTTTTCCCAGA
TTGAATGCCACTCATATGCTGGAATTATTAAGAGGAAAGAGGCTGGCGTTTGTTGGTGAT
TCTCTCAATAGGAACATGTGGGAATCCCTTATTTGCATTCTTAGAAACTCTGTCAAAGAT
CAGAAAAAGGTTTATGAAGAATTTGGAAGACACCATTTCAGGACAGAAGCTTCGCATTCG
TTTATTTTTGAAGAGTATAAATGCAGAGTGGAGTTCTTTGTGTCTCCTTTCTTGGTTCAA
CAATGGGAAGTTGCAGATAAAAAAGGAGGGAAGAAGGAAACGCTTCGACTTGATTTGATT
GGAGAGTCGGCTGAGAAGTATAAAAATGCAGATATCATAGTCTTTAACACCGGCCACTGG
TGGACTCATGAGAAGACTTCCTTAGGGAAAGACTATTATCAAGAAGGAAGTCATGTGCAC
AGCCAACTAAATGTTCTTGAGGCCTTTCGAAAAGCATTAACAACATGGGGAAGATGGGTC
GACGCTCATATAAATCCCAAGAAGACAATTGTTCTCTTCAGAGGTTATTCTGCTTCTCAT
TTCAGTGGCGGGCAATGGAATTCTGGCGGGGCATGCGACAGTGAAACGGAGCCAATAAAG
AACGACACATATTTGACCCCGTATCCATCCAAGATGACAGTATTAGAAAATGCCTTCAAA
GGAATGAAAACTCAAGTTTCTTATCTCAATATCACAAGAATGTCGGACTATAGAAAAGAC
GGTCACCCATCGATATATAGGAAACCGAATTTGACAGACAAGGAGAGGAAATCGCAATGG
AGATATCAAGATTGCAGCCATTGGTGCCTCCCTGGTGTACCTGATGCTTGGAATGAGCTG
TTATATGCTGAACTTTTGGTAAGACAACACCAAAAACAACATGAGAAAAAGTCATAG

Peptide Sequence

PEP ID

XP_016473375.1
PEP Infomation

PREDICTED: protein trichome birefringence-like [Nicotiana tabacum]
Sequence

MAETAKYAPINGGTLVTDLKTHFSIVKTKRSIACAYGFVFVFIVVTTFLAFTPNPNNSSS
PWFTNIFSLSSSRVEDGTYRSHFSSIFSNLFPKSSQQVQNLVANNVPTISNTKFEQPHLN
KEPSIGQKHTQNNESHDKVGVLEKPFNQSTVLDQKPYVNVTVPINSSVLSYKESSVVKNQ
TQSKDFDDKVGILKANQSTIQAANSPVNVNQTQCKKFDDKVGILKANQSTIEATKSPVNV
NQTENSAPKYSYGDKNANGNGEKGIIEKEVKKNFTSSLVKKQRNETNLDVSVKKGDEDLV
KSLLNCDFFDGNWVTDESYPLYKPGSCSLIDEQFSCFLNGRPDSGYLKMKWKPKACTFPR
LNATHMLELLRGKRLAFVGDSLNRNMWESLICILRNSVKDQKKVYEEFGRHHFRTEASHS
FIFEEYKCRVEFFVSPFLVQQWEVADKKGGKKETLRLDLIGESAEKYKNADIIVFNTGHW
WTHEKTSLGKDYYQEGSHVHSQLNVLEAFRKALTTWGRWVDAHINPKKTIVLFRGYSASH
FSGGQWNSGGACDSETEPIKNDTYLTPYPSKMTVLENAFKGMKTQVSYLNITRMSDYRKD
GHPSIYRKPNLTDKERKSQWRYQDCSHWCLPGVPDAWNELLYAELLVRQHQKQHEKKS

Transcript Sequence

Gene sequence data has not been registered.